BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB006B01SP1|AL425471
(896 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1342 1725 0.0
>3x_Contig1342
Length = 7422
Score = 1725 bits (867), Expect = 0.0
Identities = 890/898 (99%), Gaps = 2/898 (0%)
Strand = Plus / Minus
Query: 1 tctggaagaaactgcagatgacgaagcatactttgacaaagacggaattcaacttccaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1636 tctggaagaaactgcagatgacgaagcatactttgacaaagacggaattcaacttccaag 1577
Query: 61 tactggtgacaagatgaaagataaactaaacgagttaccagaagccgatatgaatatgct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1576 tactggtgacaagatgaaagataaactaaacgagttaccagaagccgatatgaatatgct 1517
Query: 121 tggrtcagaagaractaatccagcactacgtggtgatgtcgcattggttatattcgatat 180
||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1516 tggatcagaagaaactaatccagcactacgtggtgatgtcgcattggttatattcgatat 1457
Query: 181 cgcaatgaagaatctgggcacatcttttgtcaagaaacatcaaggatactacgccgttac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1456 cgcaatgaagaatctgggcacatcttttgtcaagaaacatcaaggatactacgccgttac 1397
Query: 241 caattcgcaagtcgatgaagagctcagcagaaacgttatgtcctacctgtttgatagatg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1396 caattcgcaagtcgatgaagagctcagcagaaacgttatgtcctacctgtttgatagatg 1337
Query: 301 cctcgagtatatcaacttattttcggaatttcaagatttaaaaagagaatatctgataaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1336 cctcgagtatatcaacttattttcggaatttcaagatttaaaaagagaatatctgataaa 1277
Query: 361 tcacgtattgcaatggctaaaggacgaacattataatatttcccttgagaaaagtatgcc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1276 tcacgtattgcaatggctaaaggacgaacattataatatttcccttgagaaaagtatgcc 1217
Query: 421 aganaaatatgtggaattattattgcatgatgttacattaaatatcaaattcatgcctgc 480
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1216 agaaaaatatgtggaattattattgcatgatgttacattaaatatcaaattcatgcctgc 1157
Query: 481 cggcgaattaaacatcgacagtctccaattgtccttcaaaaagtattctgcatacatcag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1156 cggcgaattaaacatcgacagtctccaattgtccttcaaaaagtattctgcatacatcag 1097
Query: 541 csaattagatgagacgaatgccaaacaacttactacattatattctggttatttgaccca 600
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1096 caaattagatgagacgaatgccaaacaacttactacattatattctggttatttgaccca 1037
Query: 601 acatctattatccaatatggataaatctgattcgaagtatgctattttgaatgctattat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1036 acatctattatccaatatggataaatctgattcgaagtatgctattttgaatgctattat 977
Query: 661 caagaaactgtaatgagacactgtatacacatttttatgtacatatttgacattaagtag 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 976 caagaaactgtaatgagacactgtatacacatttttatgtacatatttgacattaagtag 917
Query: 721 taaggtaagcmgtggagccaatatttccacagttttataactctaattaaa-ccaattct 779
|||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 916 taaggtaagcagtggagccaatatttccacagttttataactctaattaaacccaattct 857
Query: 780 gagaaacg-agaaatcatagattctgttggccttcgttgcctcgatattcaataaatcac 838
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 856 gagaaacgaagaaatcatagattctgttggccttcgttgcctcgatattcaataaatcac 797
Query: 839 gacactgtttcttcgagagttgacctgcagtccgtattaattctctgaatagtamctc 896
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 796 gacactgtttcttcgagagttgacctgcagtccgtattaattctctgaatagtacctc 739
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6847
Number of Sequences: 1807
Number of extensions: 6847
Number of successful extensions: 32
Number of sequences better than 1.0e-20: 1
length of query: 896
length of database: 10,358,551
effective HSP length: 16
effective length of query: 880
effective length of database: 10,329,639
effective search space: 9090082320
effective search space used: 9090082320
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)